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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1235Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (363 aa)    
Predicted Functional Partners:
CAP_6601
Glutamate synthase [NADPH] large chain.
  
 0.999
CAP_6081
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
  
 
 0.956
CAP_6080
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
  
 
 0.943
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.920
CAP_3204
Malonyl CoA-acyl carrier protein transacylase.
    
 0.918
CAP_3167
Branched-chain amino acid aminotransferase.
  
 
 0.917
CAP_3573
Putative aminotransferase.
  
 
 0.905
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
    
 0.902
CAP_2176
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
  
 
 0.878
CAP_7016
Glutamate synthase [NADPH] small chain.
  
 0.857
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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