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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1259UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (389 aa)    
Predicted Functional Partners:
CAP_5763
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 
 0.924
CAP_1610
Putative oxidoreductase protein.
 
 0.902
CAP_1260
UDP-glucose 4-epimerase.
 
 
 0.865
CAP_6305
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.835
CAP_5777
Putative acetyltransferase.
 
 0.777
CAP_5135
Sorbitol dehydrogenase.
  
 
 0.771
CAP_5756
Acetyltransferase (isoleucine patch superfamily).
 
 
 0.760
CAP_0124
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.756
CAP_0388
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.728
CAP_0395
Putative glucose-fructose oxidoreductase oxidoreductase protein.
 
 
 0.723
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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