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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1394Hypothetical protein. (143 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase.
  
 
 0.905
CAP_0118
M38 (beta-aspartyl dipeptidase) family protein.
  
 
 0.788
CAP_1043
Amidohydrolase.
  
 
 0.788
CAP_3871
Amidohydrolase.
  
 
 0.788
CAP_5281
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
 
 0.788
CAP_1395
Hypothetical protein.
       0.660
CAP_3428
N-formylglutamate deformylase.
  
  
 0.539
CAP_1393
Hypothetical protein.
       0.535
CAP_4461
Succinate dehydrogenase flavoprotein subunit.
     
 0.490
CAP_1108
2-methylcitrate dehydratase.
   
    0.482
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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