truA protein (Chondromyces apiculatus) - STRING interaction network

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Score

truA

tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (265 aa)

Predicted Functional Partners:

CAP_7098

0.915

rpoA

0.890

CAP_1839

0.862

truB

0.807

ybeY

0.768

rsmH

0.767

rpsQ

0.743

CAP_1418

0.718

rpoC

0.717

rsmA

0.709

Your Current Organism:

Chondromyces apiculatus

NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAP_1418	truA	CAP_1418	CAP_1419	Hypothetical protein.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.718
CAP_1839	CAP_7098	CAP_1839	CAP_7098	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	Sulfur carrier protein adenylyltransferase ThiF.	0.776
CAP_1839	rpoA	CAP_1839	CAP_1838	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
CAP_1839	rpoC	CAP_1839	CAP_5631	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
CAP_1839	rpsQ	CAP_1839	CAP_1823	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	SSU ribosomal protein S17p (S11e); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
CAP_1839	truA	CAP_1839	CAP_1419	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.862
CAP_1839	truB	CAP_1839	CAP_5289	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.797
CAP_1839	ybeY	CAP_1839	CAP_3099	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.965
CAP_7098	CAP_1839	CAP_7098	CAP_1839	Sulfur carrier protein adenylyltransferase ThiF.	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	0.776
CAP_7098	rpsQ	CAP_7098	CAP_1823	Sulfur carrier protein adenylyltransferase ThiF.	SSU ribosomal protein S17p (S11e); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.720
CAP_7098	truA	CAP_7098	CAP_1419	Sulfur carrier protein adenylyltransferase ThiF.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.915
CAP_7098	ybeY	CAP_7098	CAP_3099	Sulfur carrier protein adenylyltransferase ThiF.	Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.791
rpoA	CAP_1839	CAP_1838	CAP_1839	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	0.995
rpoA	rpoC	CAP_1838	CAP_5631	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpsQ	CAP_1838	CAP_1823	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	SSU ribosomal protein S17p (S11e); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
rpoA	rsmA	CAP_1838	CAP_3412	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.552
rpoA	truA	CAP_1838	CAP_1419	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.890
rpoA	truB	CAP_1838	CAP_5289	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.782
rpoC	CAP_1839	CAP_5631	CAP_1839	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	LSU ribosomal protein L17p; Belongs to the bacterial ribosomal protein bL17 family.	0.993
rpoC	rpoA	CAP_5631	CAP_1838	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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