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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_16212-isopropylmalate synthase. (604 aa)    
Predicted Functional Partners:
CAP_0074
Xanthine dehydrogenase, molybdenum binding subunit.
 0.927
CAP_6381
Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR.
 0.917
CAP_8526
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
 
 0.915
CAP_4260
Molybdopterin dehydrogenase, FAD-binding protein.
 
 0.910
CAP_0076
Xanthine dehydrogenase, FAD binding subunit.
 0.862
CAP_4888
3-isopropylmalate dehydratase large subunit.
  
  
  0.855
CAP_6380
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
 
 0.843
CAP_4172
Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR.
 0.796
CAP_4173
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
 
 0.784
CAP_3167
Branched-chain amino acid aminotransferase.
  
  
  0.762
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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