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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1698Thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family. (545 aa)    
Predicted Functional Partners:
CAP_4888
3-isopropylmalate dehydratase large subunit.
 
 
 0.984
CAP_5392
3-isopropylmalate dehydrogenase.
 
 0.981
CAP_5366
2-isopropylmalate synthase.
 
 
 0.978
CAP_5178
NAD-dependent malic enzyme.
  
 
 0.931
CAP_8139
NADP-dependent malic enzyme.
  
 
 0.928
CAP_4324
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.925
CAP_7850
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
  
  
 
0.924
CAP_6160
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.923
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 
 0.920
CAP_1462
Pyruvate,phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.917
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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