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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1710Flp pilus assembly protein CpaB. (265 aa)    
Predicted Functional Partners:
CAP_1709
Hypothetical protein; Belongs to the bacterial secretin family.
 
  
 0.991
CAP_1707
Flp pilus assembly protein TadB.
 
  
 0.990
CAP_1706
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
  
 0.987
CAP_1708
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
 0.982
CAP_1704
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
 0.963
CAP_6152
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
 0.917
CAP_1716
Hypothetical protein.
  
  
 0.874
CAP_1714
Hypothetical protein.
  
  
 0.870
CAP_1713
Hypothetical protein.
  
  
 0.830
CAP_6870
Hypothetical protein.
  
    0.683
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.