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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1856RsbR, positive regulator of sigma-B. (354 aa)    
Predicted Functional Partners:
CAP_7941
Anti-sigma B factor RsbT.
 
  0.883
CAP_6897
Anti-sigma B factor RsbT.
 
  0.882
CAP_7940
ATP-binding region, ATPase-like protein.
  
  0.873
CAP_6896
Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX.
 
  0.852
CAP_2046
Two-component hybrid sensor and regulator.
 
 
 0.844
CAP_6895
RsbS, negative regulator of sigma-B.
 
 
   0.829
CAP_7942
RsbS, negative regulator of sigma-B.
 
 
   0.829
CAP_5118
Hypothetical protein.
 
 
 0.816
CAP_8879
Hypothetical protein.
 
 
 0.816
CAP_8024
Hypothetical protein.
  
     0.765
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.