Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CAP_1879Metal-dependent hydrolase of the beta-lactamase superfamily I. (280 aa)    
Predicted Functional Partners:
CAP_1878
Response regulator of zinc sigma-54-dependent two-component system.
       0.789
CAP_8115
Adenylate cyclase.
 
     0.680
CAP_1612
Adenylate cyclase.
 
     0.673
CAP_2043
Adenylate cyclase.
 
     0.652
CAP_5172
Adenylate cyclase.
 
     0.649
CAP_8580
Adenylate/guanylate cyclase.
 
     0.607
CAP_1811
Hypothetical protein.
 
     0.583
CAP_1880
Hypothetical protein.
       0.556
CAP_7340
Chemotaxis protein methyltransferase CheR.
  
  
 0.548
CAP_5014
Hypothetical protein.
  
  
 0.537
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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