STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1936Hypothetical protein. (362 aa)    
Predicted Functional Partners:
CAP_1943
Hypothetical protein.
 
     0.908
CAP_1939
VgrG protein.
 
    0.883
CAP_2165
Mll2356 protein.
 
  
 0.881
CAP_6451
Hypothetical protein.
 
  
 0.876
CAP_1937
Hypothetical protein.
 
     0.869
CAP_1938
VgrG protein.
 
     0.866
CAP_1529
HEAT repeat protein.
 
  
 0.801
CAP_6455
HEAT repeat protein.
 
  
 0.798
CAP_0791
Hypothetical protein.
 
     0.778
CAP_1535
Hypothetical protein.
 
     0.778
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.