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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1959Internalin, putative. (922 aa)    
Predicted Functional Partners:
CAP_3893
Hypothetical protein.
  
     0.666
CAP_1873
Hypothetical protein.
  
 
   0.663
CAP_0018
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
     0.650
CAP_6524
Hemagglutinin/hemolysin-related protein.
  
     0.639
CAP_1961
Hypothetical protein.
 
     0.633
CAP_8174
Hypothetical protein.
  
     0.623
CAP_0060
Hypothetical protein.
  
     0.618
CAP_7491
Hypothetical protein.
  
     0.607
CAP_8910
Hypothetical protein.
  
   0.603
CAP_4932
FHA domain containing protein.
  
     0.597
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.