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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2066Hypothetical protein. (801 aa)    
Predicted Functional Partners:
CAP_5769
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.809
CAP_8789
Hypothetical protein.
  
   
 0.712
CAP_1521
Hypothetical protein.
  
     0.694
CAP_2065
Major facilitator family transporter.
 
  
 0.685
CAP_0354
Hypothetical protein; Belongs to the peptidase S51 family.
  
     0.681
CAP_1203
Hypothetical protein.
  
     0.680
CAP_3728
Hypothetical protein.
  
     0.676
CAP_0781
Hypothetical protein.
  
     0.667
CAP_2869
Hypothetical protein.
  
     0.618
CAP_4541
Hypothetical protein.
  
     0.617
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.