Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CAP_2089MoxR-like ATPase. (361 aa)    
Predicted Functional Partners:
CAP_2090
Hypothetical protein.
 
   
 0.952
CAP_2091
Mg-chelatase subunit ChlD.
 
    0.951
CAP_2092
HEAT repeat protein.
 
     0.821
CAP_2624
Mg-chelatase subunit ChlD.
 
    0.793
CAP_2093
Methylated-DNA-(protein)-cysteine S-methyltransferase.
       0.686
CAP_2366
Hypothetical protein.
  
 
 0.606
CAP_2622
Hypothetical protein.
 
   
 0.511
CAP_2088
Hypothetical protein.
       0.498
kptA
RNA:NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
  
     0.468
CAP_1961
Hypothetical protein.
  
     0.434
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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