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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2202Hypothetical protein. (110 aa)    
Predicted Functional Partners:
CAP_7872
Hypothetical protein.
  
 
 0.945
CAP_2111
Hypothetical protein.
  
 
 0.775
CAP_1992
Vitamin B12 ABC transporter, ATPase component BtuD.
    
 0.630
CAP_2204
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
  
  
 0.514
CAP_3125
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
  
 0.514
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
   
  
 0.491
CAP_2445
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
    
  0.468
CAP_7215
SN-glycerol-3-phosphate transport ATP-binding protein ugpC; Belongs to the ABC transporter superfamily.
    
  0.468
CAP_2201
Hypothetical protein.
       0.448
CAP_4580
Hypothetical protein.
 
  
 0.416
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.