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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2203Hypothetical protein. (659 aa)    
Predicted Functional Partners:
CAP_0742
NAD-dependent epimerase/dehydratase.
   
    0.776
CAP_0558
Blue copper oxidase CueO precursor.
  
  
 0.676
CAP_3686
Multicopper oxidase.
  
  
 0.676
CAP_0841
Hypothetical protein.
  
  
 0.641
CAP_2755
Hypothetical protein.
  
  
 0.641
CAP_6465
Hypothetical protein.
   
    0.617
trmB
tRNA (guanine46-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.617
CAP_6570
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.599
CAP_2204
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
       0.597
CAP_2205
Transcriptional regulator, ArsR family.
 
   
 0.580
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.