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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2364RsbR, positive regulator of sigma-B. (376 aa)    
Predicted Functional Partners:
CAP_5693
Two-component hybrid sensor and regulator.
  
 0.999
CAP_5118
Hypothetical protein.
  
 0.995
CAP_8879
Hypothetical protein.
  
 0.995
CAP_2046
Two-component hybrid sensor and regulator.
  
 0.988
CAP_2347
Chemotaxis protein methyltransferase CheR.
  
 0.988
CAP_2412
Hypothetical protein.
  
 0.988
CAP_4027
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.980
CAP_7218
Sensory box histidine kinase/response regulator.
  
 0.979
CAP_8491
Chemotaxis protein methyltransferase CheR.
  
 0.972
CAP_6168
Response regulator receiver/ATP-binding region.
 
 0.963
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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