Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2467Helicase/Type III restriction enzyme. (1787 aa)    
Predicted Functional Partners:
CAP_2466
Superfamily II DNA/RNA helicase, SNF2 family.
 
   
 0.953
CAP_2465
Putative restriction /modification enzyme.
 
     0.949
CAP_2464
Hypothetical protein.
 
     0.942
CAP_2463
Hypothetical protein.
 
     0.887
CAP_2124
Formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
 
  
 0.702
CAP_0894
Hypothetical protein.
 
     0.692
CAP_0415
Formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
  
  
 0.661
CAP_2468
Hypothetical protein.
       0.571
CAP_4860
Excinuclease ABC subunit C.
   
    0.545
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
   
    0.545
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.