Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CAP_2478Alkanal monooxygenase-like protein. (343 aa)    
Predicted Functional Partners:
CAP_7016
Glutamate synthase [NADPH] small chain.
  
 
 0.835
CAP_7768
Benzoyl-CoA oxygenase component A.
     
 0.803
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
  0.796
CAP_1171
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
   
 
 0.681
CAP_2024
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
   
 
 0.681
CAP_4076
Hydroxymethylpyrimidine ABC transporter, transmembrane component.
  
 
 0.663
CAP_4075
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 
 0.645
CAP_2078
Bifunctional P-450:NADPH-P450 reductase 1.
    
 0.598
CAP_4011
Putative reductase.
  
 0.586
CAP_6792
Putative sulfonate/nitrate transport system substrate-binding protein.
  
 
 0.569
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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