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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2533DEAD/DEAH box helicase domain protein. (1820 aa)    
Predicted Functional Partners:
CAP_2532
Hypothetical protein.
 
     0.951
CAP_2534
Hypothetical protein.
       0.773
CAP_2535
Hypothetical protein.
       0.615
CAP_6467
Hypothetical protein.
  
     0.599
CAP_6123
Hypothetical protein.
  
     0.586
CAP_4044
Hypothetical protein.
  
     0.525
CAP_2531
RecF/RecN/SMC N terminal domain, putative.
       0.510
CAP_3505
Hypothetical protein.
  
     0.504
CAP_1052
3-oxoacyl-(acyl-carrier-protein) synthase.
  
     0.481
CAP_7424
Hypothetical protein.
  
     0.481
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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