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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2568Hypothetical protein. (534 aa)    
Predicted Functional Partners:
CAP_5216
Hypothetical protein.
 
  
 0.818
CAP_1520
Phycocyanobilin:ferredoxin oxidoreductase.
  
     0.586
CAP_4444
Hypothetical protein.
 
  
 0.569
CAP_6386
Hypothetical protein.
  
     0.555
CAP_5215
Phytoene synthase.
 
 
 0.541
CAP_5219
Hydroxyneurosporene synthase.
     
 0.485
CAP_6776
Hypothetical protein.
 
  
 0.462
CAP_8389
Hypothetical protein.
  
     0.456
CAP_5686
Putative geranylgeranyl-diphosphate geranylgeranyltransferase.
    
 0.417
CAP_2566
Non-ribosomal peptide synthetase.
       0.413
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.