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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2639D-2-hydroxyglutarate dehydrogenase. (479 aa)    
Predicted Functional Partners:
CAP_6601
Glutamate synthase [NADPH] large chain.
    
 0.821
CAP_8139
NADP-dependent malic enzyme.
  
 
 0.792
CAP_5125
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.762
CAP_4888
3-isopropylmalate dehydratase large subunit.
    
  0.720
CAP_5013
Electron transfer flavoprotein, alpha subunit.
 
 
 0.619
CAP_5012
Electron transfer flavoprotein, beta subunit.
 
 
 0.608
CAP_5135
Sorbitol dehydrogenase.
  
 
 0.583
CAP_5338
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit.
  
     0.566
CAP_7016
Glutamate synthase [NADPH] small chain.
   
 0.545
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.539
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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