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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alcAllantoicase; Belongs to the allantoicase family. (340 aa)    
Predicted Functional Partners:
CAP_2958
Hypothetical protein.
 
  0.994
CAP_2960
Allantoinase.
 
 
 0.991
CAP_2957
5-Hydroxyisourate Hydrolase (HIUase); Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.968
ureB
Urease beta subunit; Belongs to the urease beta subunit family.
 
  
  0.958
CAP_1390
Urease alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
  
  0.874
CAP_4419
Putative ATPase (AAA+ superfamily); Belongs to the AAA ATPase family.
   
 
 0.743
CAP_6554
Cell division protein FtsH.
   
 
 0.743
CAP_2961
Oxidoreductase.
     
 0.681
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 
 
 0.675
CAP_4787
Hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.653
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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