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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_2961Oxidoreductase. (471 aa)    
Predicted Functional Partners:
CAP_4173
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
  
  
  0.916
CAP_2960
Allantoinase.
       0.805
CAP_2957
5-Hydroxyisourate Hydrolase (HIUase); Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.779
CAP_2958
Hypothetical protein.
    
  0.776
alc
Allantoicase; Belongs to the allantoicase family.
     
 0.681
atpA
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.656
CAP_6383
Cobalt-zinc-cadmium resistance protein CzcD.
  
    0.575
CAP_3887
Anthraniloyl-CoA monooxygenase.
  
 0.565
CAP_0076
Xanthine dehydrogenase, FAD binding subunit.
  
  
  0.545
CAP_2094
Iron-sulfur cluster-binding protein, Rieske family.
 
     0.530
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.