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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3067Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (460 aa)    
Predicted Functional Partners:
CAP_8071
Oligopeptide transport system permease protein OppC.
 
 0.998
CAP_6827
Oligopeptide transport system permease protein OppC.
 
 0.993
CAP_7902
Oligopeptide transport system permease protein OppC.
 
 0.986
CAP_6828
Dipeptide transport system permease protein DppB.
 
 0.983
CAP_8072
Oligopeptide transport system permease protein OppB.
 
 0.983
CAP_7901
Oligopeptide transport system permease protein OppB.
 
 0.981
CAP_8073
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
 
 
 0.973
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
    
0.859
CAP_9055
Hypothetical protein.
  
 
 0.859
CAP_8069
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 
 
0.800
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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