| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAP_2209 | CAP_5652 | CAP_2209 | CAP_5652 | Signal recognition particle, subunit Ffh SRP54. | Hypothetical protein. | 0.589 |
| CAP_2209 | CAP_5779 | CAP_2209 | CAP_5779 | Signal recognition particle, subunit Ffh SRP54. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.979 |
| CAP_2209 | ftsY | CAP_2209 | CAP_0168 | Signal recognition particle, subunit Ffh SRP54. | Signal recognition particle receptor protein FtsY (alpha subunit); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.999 |
| CAP_2209 | rplW | CAP_2209 | CAP_0436 | Signal recognition particle, subunit Ffh SRP54. | LSU ribosomal protein L23p (L23Ae); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.982 |
| CAP_2209 | rpmC | CAP_2209 | CAP_1822 | Signal recognition particle, subunit Ffh SRP54. | LSU ribosomal protein L29p (L35e); Belongs to the universal ribosomal protein uL29 family. | 0.981 |
| CAP_2209 | secA | CAP_2209 | CAP_3097 | Signal recognition particle, subunit Ffh SRP54. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.936 |
| CAP_2209 | secY | CAP_2209 | CAP_1833 | Signal recognition particle, subunit Ffh SRP54. | Preprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.992 |
| CAP_2209 | yidC | CAP_2209 | CAP_5534 | Signal recognition particle, subunit Ffh SRP54. | Inner membrane protein translocase component YidC, long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.945 |
| CAP_5652 | CAP_2209 | CAP_5652 | CAP_2209 | Hypothetical protein. | Signal recognition particle, subunit Ffh SRP54. | 0.589 |
| CAP_5652 | CAP_8566 | CAP_5652 | CAP_8566 | Hypothetical protein. | DNA polymerase I. | 0.433 |
| CAP_5652 | ftsY | CAP_5652 | CAP_0168 | Hypothetical protein. | Signal recognition particle receptor protein FtsY (alpha subunit); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.592 |
| CAP_5652 | rplW | CAP_5652 | CAP_0436 | Hypothetical protein. | LSU ribosomal protein L23p (L23Ae); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.940 |
| CAP_5652 | rpmC | CAP_5652 | CAP_1822 | Hypothetical protein. | LSU ribosomal protein L29p (L35e); Belongs to the universal ribosomal protein uL29 family. | 0.927 |
| CAP_5652 | secA | CAP_5652 | CAP_3097 | Hypothetical protein. | Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.939 |
| CAP_5652 | yidC | CAP_5652 | CAP_5534 | Hypothetical protein. | Inner membrane protein translocase component YidC, long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.437 |
| CAP_5779 | CAP_2209 | CAP_5779 | CAP_2209 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle, subunit Ffh SRP54. | 0.979 |
| CAP_5779 | CAP_8566 | CAP_5779 | CAP_8566 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | DNA polymerase I. | 0.407 |
| CAP_5779 | ftsY | CAP_5779 | CAP_0168 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle receptor protein FtsY (alpha subunit); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.980 |
| CAP_5779 | rplW | CAP_5779 | CAP_0436 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | LSU ribosomal protein L23p (L23Ae); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.724 |
| CAP_5779 | rpmC | CAP_5779 | CAP_1822 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | LSU ribosomal protein L29p (L35e); Belongs to the universal ribosomal protein uL29 family. | 0.722 |
STRING v12.5 is now available!
