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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3185Hypothetical protein. (388 aa)    
Predicted Functional Partners:
CAP_0388
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.777
CAP_3186
Methylaspartate mutase S chain.
       0.689
CAP_3188
Methylaspartate mutase, E subunit.
       0.689
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.682
CAP_2078
Bifunctional P-450:NADPH-P450 reductase 1.
    
 0.545
CAP_3189
Putative L-ORNITHINE 5-MONOOXYGENASE OXIDOREDUCTASE PROTEIN.
       0.497
CAP_3184
Mobile element protein.
       0.469
CAP_5153
Long-chain-fatty-acid--CoA ligase.
     
 0.423
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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