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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3207Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (522 aa)    
Predicted Functional Partners:
CAP_3208
Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family.
       0.741
CAP_1016
Glucan endo-1,3-beta-glucosidase A1.
 
   
 0.680
CAP_6482
Hypothetical protein.
  
     0.602
CAP_0716
Hypothetical protein.
 
 
 0.583
CAP_8189
Extracellular protease domain protein.
  
     0.569
CAP_5160
Hypothetical protein.
 
     0.566
CAP_6359
Putative lipoprotein.
  
     0.566
CAP_8261
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.565
CAP_6357
Putative lipoprotein.
  
     0.559
CAP_5636
Putative integral membrane protein.
  
     0.540
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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