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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3208Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. (324 aa)    
Predicted Functional Partners:
CAP_3207
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
       0.741
CAP_0751
LysR family transcriptional regulator YnfL; Belongs to the LysR transcriptional regulatory family.
  
     0.725
CAP_0589
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.657
CAP_4477
Transcriptional regulator PtxR; Belongs to the LysR transcriptional regulatory family.
  
     0.641
CAP_0559
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.639
CAP_3234
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.636
CAP_6170
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.631
CAP_6069
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.578
CAP_1086
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.575
CAP_6195
Putative transcriptional regulator protein, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.549
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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