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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3250Hypothetical protein. (111 aa)    
Predicted Functional Partners:
CAP_2164
Long-chain-fatty-acid--CoA ligase.
  
 0.965
CAP_8704
Ser/Thr protein phosphatase family protein.
    
 0.935
CAP_3204
Malonyl CoA-acyl carrier protein transacylase.
   
 0.931
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
  
 0.910
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 0.787
CAP_3198
Malonyl CoA-acyl carrier protein transacylase.
    
 0.781
CAP_0469
Malonyl CoA-acyl carrier protein transacylase.
    
 0.754
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
   
 0.754
rpsC
SSU ribosomal protein S3p (S3e); Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.745
CAP_1991
Hypothetical protein.
  
 0.739
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.