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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3324Hypothetical protein. (570 aa)    
Predicted Functional Partners:
CAP_3575
Surfactant, pulmonary-associated protein D.
  
     0.711
CAP_0305
Hypothetical protein.
  
     0.691
CAP_3758
Hypothetical protein.
  
     0.691
CAP_7221
Hypothetical protein.
  
     0.682
CAP_6985
Hypothetical protein.
  
     0.681
CAP_6462
Hypothetical protein.
  
     0.677
CAP_8313
Hypothetical protein.
  
     0.677
CAP_2750
Hypothetical protein.
  
     0.665
CAP_4292
Hypothetical protein.
  
     0.658
CAP_1912
Hypothetical protein.
  
     0.644
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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