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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3369Uracil phosphoribosyltransferase. (271 aa)    
Predicted Functional Partners:
udk
Uridine kinase.
  
 0.995
CAP_7495
Pyrimidine-nucleoside phosphorylase.
 
 
 0.974
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.973
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
 
 0.949
CAP_8587
Dihydropyrimidine dehydrogenase.
   
 
 0.940
CAP_2507
Purine nucleoside phosphorylase.
  
 
 0.933
CAP_6138
Uracil phosphoribosyltransferase.
     
 0.932
CAP_4135
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
  
 0.931
guaA
GMP synthase/glutamine-hydrolyzing protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.926
CAP_8159
HAD superfamily (Subfamily IG) hydrolase, 5'-Nucleotidase.
 
 
  0.923
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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