Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CAP_3383Putative esterase. (374 aa)    
Predicted Functional Partners:
CAP_5153
Long-chain-fatty-acid--CoA ligase.
  
 0.784
CAP_4444
Hypothetical protein.
   
 
 0.702
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
  
 0.668
CAP_3199
Malonyl CoA-acyl carrier protein transacylase.
  
 0.628
CAP_8802
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.621
CAP_4354
Hypothetical protein.
  
     0.571
CAP_6531
NADH-ubiquinone oxidoreductase chain F.
    
  0.557
CAP_1238
Collagen triple helix repeat protein.
  
     0.546
CAP_3089
BNR repeat domain protein.
  
     0.545
CAP_6432
Hypothetical protein.
  
 
   0.540
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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