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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3497Formate dehydrogenase O alpha subunit. (187 aa)    
Predicted Functional Partners:
CAP_3494
Formate dehydrogenase O beta subunit.
 
 0.999
CAP_8237
Formate hydrogenlyase subunit 2.
 
 0.977
CAP_1171
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
 
 0.932
CAP_2024
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
 
 0.932
CAP_3491
Hypothetical protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.932
CAP_2031
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.929
CAP_3493
Polysulfide reductase, subunit C, putative.
 
  
 0.862
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
    
  0.858
CAP_6582
Formate dehydrogenase chain D.
 
 
 0.854
CAP_8802
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.841
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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