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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3500Transcriptional regulator, TetR family. (212 aa)    
Predicted Functional Partners:
CAP_3499
Hypothetical protein.
       0.762
CAP_3193
Hypothetical protein.
  
     0.749
CAP_5967
Hypothetical protein.
  
     0.748
CAP_0782
Sigma-24 protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.742
CAP_3074
Hypothetical protein.
  
     0.729
CAP_7351
Hypothetical protein.
  
    0.717
CAP_2755
Hypothetical protein.
  
     0.708
CAP_1106
Hypothetical protein.
  
     0.697
CAP_0841
Hypothetical protein.
  
     0.696
CAP_4799
Hypothetical protein.
  
     0.672
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.