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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3506Hypothetical protein. (306 aa)    
Predicted Functional Partners:
CAP_3505
Hypothetical protein.
       0.620
CAP_3507
Hypothetical protein.
       0.596
CAP_1987
Enoyl-CoA hydratase in isoleucine degradation.
  
 0.545
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
  
 0.533
CAP_3199
Malonyl CoA-acyl carrier protein transacylase.
  
 0.477
CAP_6004
Hypothetical protein.
 
     0.437
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
  
 
  0.437
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
  
 0.422
CAP_0469
Malonyl CoA-acyl carrier protein transacylase.
  
 0.416
CAP_2601
Putative short-chain dehydrogenase.
  
 
 0.410
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.