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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3650Transcriptional regulator, TetR family. (275 aa)    
Predicted Functional Partners:
CAP_3651
Long-chain-fatty-acid--CoA ligase.
       0.773
CAP_6689
Hypothetical protein.
  
     0.631
CAP_8970
Hypothetical protein.
 
     0.630
CAP_6515
Spore-associated protein A precursor.
  
     0.601
CAP_0836
Hypothetical protein.
  
     0.592
CAP_7734
Ferredoxin.
  
     0.587
CAP_3652
Hypothetical protein.
       0.572
CAP_1765
Hypothetical protein.
  
     0.530
CAP_1040
Ferredoxin.
  
     0.512
CAP_3111
DGPF domain protein.
  
     0.495
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.