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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3767Hypothetical protein. (763 aa)    
Predicted Functional Partners:
CAP_6601
Glutamate synthase [NADPH] large chain.
   
 
  0.992
CAP_7016
Glutamate synthase [NADPH] small chain.
   
 
 0.918
CAP_0858
Ferredoxin / FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
     
 0.908
CAP_7182
Arginine N-succinyltransferase.
    
  0.898
CAP_0860
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
    
 0.851
argH
Argininosuccinate lyase.
     
 0.802
CAP_7267
Acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.773
CAP_6602
Glutamate synthase [NADPH] small chain.
   
 
  0.761
CAP_4699
Guanidinobutyrase; Belongs to the arginase family.
     
 0.747
CAP_2962
Low-specificity L-threonine aldolase.
    
  0.739
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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