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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3829UDP-glucose dehydrogenase. (450 aa)    
Predicted Functional Partners:
CAP_5709
dTDP-glucose 4,6-dehydratase.
 0.993
CAP_6915
UDP-glucose 4-epimerase.
 
 0.967
CAP_7611
UDP-glucose 4-epimerase.
 
 0.959
CAP_3195
Hypothetical protein.
 
 0.958
CAP_6640
UDP-glucose 4-epimerase.
 
 0.958
CAP_3276
NAD-dependent epimerase/dehydratase family protein.
 
 0.957
CAP_5291
NAD dependent epimerase/dehydratase family.
  
 0.951
CAP_6293
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.951
CAP_2411
PTS system, fructose-specific IIB component.
     
 0.943
CAP_1671
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic.
     
 0.929
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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