Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CAP_3840Putative cAMP phosphodiesterases class-II. (255 aa)    
Predicted Functional Partners:
CAP_1811
Hypothetical protein.
 
   0.897
CAP_3841
cAMP-binding protein.
       0.783
CAP_1755
Hypothetical protein.
   
   0.738
CAP_6864
Adventurous gliding motility protein AgmI.
 
     0.561
CAP_4613
Outer membrane efflux protein, putative.
  
     0.527
CAP_2712
TPR repeat protein.
  
    0.489
CAP_5020
Hypothetical protein.
  
     0.484
CAP_2387
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.481
CAP_1612
Adenylate cyclase.
 
   
 0.467
CAP_0792
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.461
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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