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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_3840Putative cAMP phosphodiesterases class-II. (255 aa)    
Predicted Functional Partners:
CAP_1755
Hypothetical protein.
   
   0.927
CAP_1811
Hypothetical protein.
 
   0.900
CAP_3841
cAMP-binding protein.
       0.784
CAP_6864
Adventurous gliding motility protein AgmI.
 
     0.561
CAP_4613
Outer membrane efflux protein, putative.
  
     0.527
CAP_2712
TPR repeat protein.
  
    0.524
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
   0.485
CAP_5020
Hypothetical protein.
  
     0.484
CAP_2387
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.481
CAP_0792
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.461
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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