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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4110Hypothetical protein. (251 aa)    
Predicted Functional Partners:
CAP_8498
UDP-galactose-lipid carrier transferase.
   
    0.754
CAP_6500
Radical SAM family enzyme / coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.718
CAP_5080
Ferredoxin.
  
    0.484
CAP_0677
Hypothetical protein.
   
    0.457
CAP_2285
Sigma54 specific transcriptional regulator, Fis family.
   
    0.457
CAP_0393
Metallo-beta-lactamase family protein.
   
    0.429
CAP_4109
Short-chain dehydrogenase/reductase SDR.
       0.427
CAP_1684
Universal stress protein family.
   
  
 0.406
CAP_2213
Universal stress protein.
   
  
 0.406
CAP_5071
Universal stress protein family.
   
  
 0.406
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.