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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4171Purine catabolism protein PucB. (227 aa)    
Predicted Functional Partners:
CAP_4174
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
 
 0.954
CAP_8526
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
 0.951
CAP_4172
Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR.
 
  
 0.896
CAP_4173
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
 
 
 0.892
CAP_0071
XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase).
 
 
 0.846
CAP_4433
Isoquinoline 1-oxidoreductase alpha subunit.
 
 
 0.809
CAP_8523
Isoquinoline 1-oxidoreductase alpha subunit.
 
 
 0.808
CAP_5611
Isoquinoline 1-oxidoreductase alpha subunit.
 
 
 0.806
CAP_6382
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
 
 0.801
CAP_2431
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
    
  0.797
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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