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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4180Acriflavin resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)    
Predicted Functional Partners:
CAP_4177
ABC transporter, permease protein.
 
   0.952
CAP_4178
ABC-type antimicrobial peptide transport system, permease component.
 
 
   0.947
CAP_4179
Methionine ABC transporter ATP-binding protein.
 
 
 0.933
CAP_3165
RND efflux system, inner membrane transporter CmeB.
 
 0.732
CAP_2866
Cell division protein FtsX.
 
 
 0.675
CAP_3219
Hypothetical protein.
 
  0.675
CAP_1567
RND multidrug efflux transporter/Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.664
CAP_5230
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.662
CAP_4198
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.659
CAP_4025
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.656
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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