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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4249Hypothetical protein. (325 aa)    
Predicted Functional Partners:
CAP_4250
Glycogen debranching enzyme-related protein.
       0.523
CAP_6392
Hypothetical protein.
  
     0.522
CAP_2268
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.482
CAP_1142
Rare lipoprotein A.
  
     0.480
CAP_8909
Putative iron-regulated protein.
  
     0.473
CAP_1197
PE-PGRS family protein.
  
     0.470
CAP_6808
Hypothetical protein.
  
     0.436
CAP_5944
Proteinase (secreted protein).
 
     0.433
CAP_7682
Hypothetical protein.
 
     0.432
CAP_8255
Hypothetical protein.
  
     0.409
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.