Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4308Hypothetical protein. (661 aa)    
Predicted Functional Partners:
CAP_5311
Adventurous gliding motility protein K.
 
 0.938
CAP_8264
Hypothetical protein.
 
 0.926
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.890
CAP_8566
DNA polymerase I.
   
 0.890
CAP_6695
Hypothetical protein.
  
 0.875
CAP_2466
Superfamily II DNA/RNA helicase, SNF2 family.
 
 
 0.804
CAP_0247
ATP-dependent RNA helicase, DEAD/DEAH box family.
  
 
 0.751
CAP_2464
Hypothetical protein.
  
     0.751
CAP_2428
Hypothetical protein.
  
     0.748
CAP_3219
Hypothetical protein.
  
     0.745
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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