Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CAP_4342Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)    
Predicted Functional Partners:
CAP_6601
Glutamate synthase [NADPH] large chain.
     
 0.909
CAP_8139
NADP-dependent malic enzyme.
    
 0.856
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
  
 0.855
CAP_7267
Acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.854
CAP_8820
Succinate-semialdehyde dehydrogenase.
  
 0.849
CAP_8583
Methylmalonate-semialdehyde dehydrogenase.
  
 0.847
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
  
 0.840
CAP_8584
N-carbamoylputrescine amidase.
  
 
 0.836
CAP_0469
Malonyl CoA-acyl carrier protein transacylase.
  
 0.834
CAP_3200
Malonyl CoA-acyl carrier protein transacylase.
  
 0.834
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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