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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4410Hypothetical protein. (235 aa)    
Predicted Functional Partners:
CAP_4412
Monooxygenase, flavin-binding family.
 
   
 0.684
CAP_3735
Hypothetical protein.
  
     0.608
CAP_4411
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.608
CAP_6785
Hypothetical protein.
  
     0.606
CAP_0942
Hypothetical protein.
  
     0.517
CAP_2601
Putative short-chain dehydrogenase.
  
     0.509
CAP_0180
TPR domain protein, putative component of TonB system.
  
     0.498
CAP_5409
Hypothetical protein.
  
     0.491
CAP_6990
Long-chain fatty acid transport protein-like protein.
  
     0.444
CAP_4413
Hypothetical protein.
       0.442
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.