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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4447BatD. (644 aa)    
Predicted Functional Partners:
CAP_4452
Hypothetical protein.
 
  
 0.968
CAP_4451
Hypothetical protein.
 
     0.955
CAP_4446
Hypothetical protein.
 
    0.942
CAP_4449
BatB.
 
     0.936
CAP_5693
Two-component hybrid sensor and regulator.
  
 
 0.929
CAP_4450
BatA aerotolerance operon protein.
 
   
 0.922
CAP_4453
MoxR-like ATPase in aerotolerance operon.
 
  
 0.846
CAP_4448
Hypothetical protein.
       0.809
CAP_8491
Chemotaxis protein methyltransferase CheR.
    
 0.758
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.742
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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