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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4597Outer membrane protein H precursor. (209 aa)    
Predicted Functional Partners:
CAP_3405
Outer membrane protein assembly factor YaeT precursor.
 
  
 0.851
fabZ
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
    0.822
CAP_6971
Surface antigen (D15).
 
  
 0.760
CAP_8845
Hypothetical protein.
 
  
 0.744
CAP_4596
Hypothetical protein.
  
 
 0.741
CAP_2010
Hypothetical protein.
  
  
 0.735
CAP_1802
WD40 repeat protein.
 
  
 0.728
CAP_0618
Outer membrane protein assembly factor YaeT precursor.
 
  
 0.719
CAP_3594
Hypothetical protein.
    
 
 0.693
CAP_4573
Hypothetical protein.
    
 
 0.693
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.