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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4648GCN5-related N-acetyltransferase. (178 aa)    
Predicted Functional Partners:
CAP_6601
Glutamate synthase [NADPH] large chain.
   
 
 0.807
CAP_3189
Putative L-ORNITHINE 5-MONOOXYGENASE OXIDOREDUCTASE PROTEIN.
 
 
 0.754
CAP_7846
Chorismate mutase I.
    
  0.727
speE
Spermidine synthase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the spermidine/spermine synthase family.
    
 0.714
CAP_2605
Hypothetical protein.
    
  0.640
aroB
Shikimate kinase I; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
    
  0.630
CAP_4649
Hypothetical protein.
  
    0.611
glnS
Glutaminyl-tRNA synthetase.
    
  0.492
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.482
CAP_4647
CmnU.
       0.449
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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