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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_4778NADH dehydrogenase. (437 aa)    
Predicted Functional Partners:
CAP_7016
Glutamate synthase [NADPH] small chain.
  
 
 0.885
CAP_1171
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
    
 0.774
CAP_2024
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
    
 0.774
CAP_8237
Formate hydrogenlyase subunit 2.
 
  
 0.772
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
   0.683
CAP_2862
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD.
  
    0.632
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
  
 0.627
CAP_0549
Long-chain-fatty-acid--CoA ligase.
  
 0.595
CAP_7636
NADH dehydrogenase (quinone).
  
 
 0.588
CAP_3742
Isocitrate dehydrogenase.
   
  
 0.583
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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